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wgcna package
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1
vote
0
replies
967
views
WGCNA trait order in heat map
wgcna
WGCNA
wgcna package
4.3 years ago
coyoung
▴ 10
0
votes
2
replies
2.5k
views
Module preservation WGCNA
wgcna
wgcna package
modulepreservation
updated 5.5 years ago by
Peter Langfelder
★ 3.0k • written 5.5 years ago by
bekah
▴ 40
0
votes
1
reply
2.0k
views
WGCNA: Matching eigengenes to samples
wgcna
wgcna package
5.5 years ago
Jack
• 0
0
votes
2
replies
1.2k
views
Using Kendall's Tau rank correlation coefficient for creating WGCNA network
wgcna package
wgcna
5.5 years ago
anni.djurhuus
• 0
2
votes
3
replies
1.5k
views
Problem for finding "Locus Link ID" from Annotation file
wgcna package
TCGA
LocusLinkID
genecode
ensembl
updated 5.6 years ago by
James W. MacDonald
65k • written 5.6 years ago by
modarzi
▴ 10
0
votes
2
replies
3.2k
views
TOMplot error: "color" is not a graphical parameter (WGCNA)
wgcna package
software error
updated 5.6 years ago by
Peter Langfelder
★ 3.0k • written 5.6 years ago by
giuseppe0525
• 0
0
votes
0
replies
1.1k
views
consensus module relationship
wgcna
wgcna package
consensus
5.6 years ago
2323982403
▴ 60
2
votes
4
replies
1.5k
views
Segfault error when loading WGCNA
wgcna
wgcna package
5.7 years ago
antoinefelden
▴ 10
2
votes
2
replies
4.9k
views
WGCNA extract genes from a module
WGCNA
wgcna package
updated 5.7 years ago by
Peter Langfelder
★ 3.0k • written 5.7 years ago by
bdy8
▴ 10
1
vote
3
replies
1.3k
views
SampleNetwork in WGCNA
wgcna
wgcna package
5.8 years ago
2323982403
▴ 60
0
votes
0
replies
2.4k
views
Use of bicor in WGCNA
WGCNA
wgcna package
wgcna
bicor
5.8 years ago
bekah
▴ 40
12
votes
15
replies
15k
views
WGCNA: Understanding module-trait correlations
wgcna package
updated 5.8 years ago by
Peter Langfelder
★ 3.0k • written 5.8 years ago by
bekah
▴ 40
0
votes
0
replies
849
views
problem for finding soft power for constructing network in WGCNA algorithm
RNA-seq
WGCNA package
soft power
5.8 years ago
modarzi
▴ 10
13 results • Page
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Answer: Subsetting RNAseq data | voomaByGroup()
by
Gordon Smyth
50k
Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
by
Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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Dario Strbenac
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shepherl
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